Publication List 2002-2005

  • T. Róg, I. Vattulainen, M. Karttunen. 2005. Modeling glycolipids: take one. Cell. Biol. Mol. Lett. 10:625-630. PDF

  • L. M. Stimson, I. Vattulainen, T. Róg, M. Karttunen. 2005. Exploring the effect of xenon on biomembranes. Cell. Biol. Mol. Lett. 10:563-569 PDF

  • M. Jemiola-Rzeminska, M. Pasenkiewicz-Gierula, K. Strzalka.2005.The behaviour of beta-carotene in the phosphatidylcholine bilayer as revealed by a molecular simulation study.Chem. Phys. Lipids 135 (1):27-37 PDF

  • K. Murzyn, T. Róg, M. Pasenkiewicz-Gierula. 2005. Phosphatidylethanolamine-phosphatidylglycerol bilayer as a model of the inner bacterial membrane. 2005. Biophys. J. 88:1091-1103. PDF

  • K. Murzyn, T. Róg, M. Pasenkiewicz-Gierula. 2004. Interactions of magainin-2 amide with membrane lipids. Lect. Notes Comput. Sc. 3037:325-331. PDF

  • T. Róg, K. Murzyn, R. Gurbiel, K. Kitamura, A. Kusumi, M. Pasenkiewicz-Gierula. 2004. Effects of phospholipid unsaturation on the structure and dynamics of the hydrocarbon core of the membrane. A Molecular Simulation Study. J. Lip. Res. 45:326-336. PDF

  • T. Róg, M. Pasenkiewicz-Gierula. 2004. Cholesterol-phospholipid hydrophobic interactions: a molecular simulation study. Biophys. Chem. 107:151-164. online

  • Gieldon A, Kazmierkiewicz R, Slusarz R, Pasenkiewicz-Gierula M, Ciarkowski J.2003. Molecular dynamics study of 4-OH-phenylacetyl-D-Y(Me)FQNRPR-NH2 selectivity to V1a receptor. J. Mol. Model 9 (6):372-378 PDF

  • T. Róg, K. Murzyn, M. Pasenkiewicz-Gierula, Molecular dynamics simulation of charged and uncharged lipid bilayers : a treatment of electrostatic interactions. Acta Biochim. Polon. 2003. PDF

  • K. Murzyn, M. Pasenkiewicz-Gierula. 2003. Construction of a toroidal model for the magainin pore.J. Mol. Model. 9(4):217-224 PDF

  • Róg, K. Murzyn, K. Hinsen, G. R. Kneller. NMoldyn: a program package for a neutron scattering analysis of molecular dynamics simulations. J. Comput. Chem. 24, 657-667, 2003. PDF

  • W.K. Subczyński, M. Pasenkiewicz-Gierula, R.N. McElhaney, J.S. Hyde, A. Kusumi. Molecular dynamics of 1-palmitoyl-2-oleoylphosphatidylcholine membranes containing transmembrane alpha-helical peptide with alternating leucine, alanine residues. Biochemistry. 42, 3939-3948, 2003. PDF

  • M. Pasenkiewicz-Gierula, T. Róg, J. Grochowski, P. Serda, R. Czarnecki, T. Librowski, S. Lochyński. Effects of a carane derivative local anesthetic on a phospholipid bilayer: a molecular dynamics simulation study. Biophys. J. 85(2), 2003. PDF

  • T. Róg, M. Pasenkiewicz-Gierula. Effects of epicholesterol on the phosphatidylcholine bilayer: a molecular simulation study. Biophys. J. 84, 1818-1226, 2003 PDF

  • K. Murzyn, Woda w symulacjach dynamiki molekularnej. Postępy Biologii Komórki, 29, 87-101, 2002. (in Polish)
  • J. Grochowski, P. Serda, M. Pasenkiewicz-Gierula, R. Czarnecki, T. Librowski, S. Lochyński, B. Frąckowiak. Structural characterization of carane derivative stereoisomers - potent local anesthetics. Acta Physica Polon. A 101, 665-674, 2002. PDF

  • T. Róg, K. Murzyn, M. Pasenkiewicz-Gierula. The dynamics of water at the phospholipid bilayer surface: a molecular dynamics simulation study. Chem. Phys. Lett. 352, 323-327, 2002. PDF

  • S. Lochyński, B. Frąckowiak, T. Librowski, R. Czarnecki, J. Grochowski, P. Serda, M. Pasenkiewicz-Gierula. Stereochemistry of terpene derivatives. Part 3. Hydrolytic kinetic resolution as a convenient approach to chiral aminohydroxyiminocaranes with local anaesthetic activity. Tetrahedron: Asymm. 13, 873-878, 2002 PDF

ModMol: Publications_2002-2005 (last edited 2011-04-28 11:56:01 by AgnieszkaKruszyna)