Publication List 2006-2008

  1. E. Falck, T. Róg, M. Karttunen, I. Vattulainen. 2008. Lateral diffusion in lipid membranes through collective flows. J. Am. Chem. Soc.130:44-45. PDF

  2. A. Bunker, P. T. Männistö, J-F. St. Pierre, T. Róg, P. Pomorski, L. Stimson, M. Karttunen. 2008. Molecular Dynamics simulations of the enzyme Catechol-O-Methyl Transferase: Methodological issues. Sar. Qsar. Env. Res. 19:179-189. PDF

  3. S. Poyry, T. Róg, M. Karttunen, I. Vattulainen. 2008. Significance of cholesterol methyl groups. J. Phys. Chem. B. 112:2922-2929.PDF

  4. W. Zhao, T. Róg, A. A. Gurtovenko, I. Vattulainen, M. Karttunen. 2008. Role of phosphatidylglycerols in the stability of bacterial membranes. Biochimie. 90:930-938.PDF

  5. H. Martinez-Seara, T. Róg, M. Karttunen, R. Reigada, I. Vattulainen. 2008. Influence of cis double bond parameterization on lipid membrane properties: How seemingly insignificant details in force field change even qualitative trends. J. Chem. Phys. 129: 105103. PDF

  6. T. Róg, M. Karttunen, I. Vattulainen, M. Jansen, E. Ikonen. 2008. Comparison of cholesterol and its direct precursors on its biosynthetic pathway: desmosterol and 7-dehydrocholesterol effects on lipid bilayers. Chem. Phys. 129:154508 PDF

  7. T. Róg, L. M. Stimson, M. Pasenkiewicz-Gierula, I. Vattulainen, and M. Karttunen. 2008. Replacing the cholesterol hydroxyl group by the ketone group facilitates sterol flip-flop and promotes membrane fluidity. J. Phys. Chem. B. 112, 1946-1952. PDF

  8. H. Martinez-Seara, T. Róg, M. Pasenkiewicz-Gierula, I. Vattulainen, M. Karttunen, and R. Reigada. 2008. Interplay of Unsaturated Phospholipids and Cholesterol in Membranes: Effect of Double Bond Position. Biophys. J. 95, 3295-3305. PDF

  9. L. Stimson, L. Dong, M. Karttunen, A. Wisniewska, M. Dutka, and T. Róg. 2007. Stearic acid spin labels in lipid bilayers: Insight through atomistic simulations. J. Phys. Chem. B 111, 12447-12453. PDF

  10. T. Róg, K. Murzyn, M. Karttunen, and M. Pasenkiewicz-Gierula. 2008. Non-polar interactions between trans-membrane helical peptide and phosphatidylcholines, sphingomyelins and cholesterol. Molecular dynamics simulation studies. J. Pept. Sci. 14, 374-382. PDF

  11. T. Róg, I. Vattulainen, A. Bunker, and M. Karttunen. 2007. Glycolipid membranes through atomistic simulations: Effect of glucose and glactose head groups on lipid bilayer properties. J. Phys. Chem. B 111, 10146-10154. PDF

  12. O.H. Samuli Ollila, T. Róg, M. Karttunen, I. Vattulainen. 2007. Role of sterol type on lateral pressure profiles of lipid membranes affecting membrane protein functionality: Comparison between cholesterok, demosterol, 7-dehydrocholesterol and ketosterol. J. Struct. Biol. 159, 311-323. PDF

  13. W. Zhao, T. Róg, A.A. Gurtovenko, I. Vattulainen, and M. Karttunen. 2007. Atomic-scale structure and electrostatics of anionic palmitoyloleoylphosphatidylglycerol lipid bilayers with Na+ counterious. Biophys. J. 92, 1114-1124. PDF

  14. P. Liguziński, B. Korzeniewski. 2007. Oxygen delivery by blood determines the maximal VO2 and work rate during whole body exercise in humans: In silico studies. Am. J. Physiol. - Heart and Circulatory Physiology. 293, H343-H353. PDF

  15. M. Markiewicz, P. Serda, T. Librowski, S. Mogilski, H. Marona, M. Pasenkiewicz-Gierula, S. Hodorowicz, S. Funari. 2007. Interaction of nonsteroidal anti-inflammatory drugs with membrane. HASYLAB Jahresbericht 2006 – Annual Report 1, Editors: R. Gherke, U. Krell, J.R. Schneider, Publisher HASYLAB/DESY, Hamburg, 1293-1294. PDF

  16. M. Markiewicz, P. Serda, T. Librowski, S. Mogilski, H. Marona, M. Pasenkiewicz-Gierula, S. Hodorowicz, S. Funari. 2007. Influence of xanthone derivatives on POPC membrane. HASYLAB Jahresbericht 2006 – Annual Report 1, Editors: R. Gherke, U. Krell, J.R. Schneider, Publisher HASYLAB/DESY, Hamburg, 1289-1290. PDF

  17. T. Róg, M. Pasenkiewicz-Gierula, I. Vattulainen, and M. Karttunen. 2007. What happens if cholesterol is made smoother: Importance of methyl substituents in cholesterol ring structure on phosphatidylcholine-sterol interaction. Biophys. J. 92, 3346-3357. PDF

  18. H. Martinez-Seara, T. Róg, M. Pasenkiewicz-Gierula, I. Vattulainen, M. Karttunen, and R. Reigada. 2007. Effect of double bond position on lipid bilayer properties: Insight through atomistic simulations. J. Phys. Chem. B. 111, 11162-11168. PDF

  19. T. Murtola, T. Róg, E. Falck, M. Karttunen, I. Vattulainen. 2006. Transient ordered domains in pure phospholipid bilayers. Phys. Rev. Letters. 97, 238102. PDF

  20. T. Róg, M. Pasenkiewicz-Gierula. 2006. Cholesterol effects on a mixed-chain phosphatidylcholine bilayer: a molecular dynamics simulation study. Biochimie. 88, 449-460. PDF

  21. T. Róg, M. Pasenkiewicz-Gierula. 2006. Cholesterol-sphingomyelin interactions: a molecular simulation study. Biophys. J. 91, 3756-3767. PDF

  22. J. Aittoniemi, T. Róg, P. Niemela, M. Pasenkiewicz-Gierula, M. Karttunen, and I. Vattulainen. 2006. Tilt – major factor in sterols’ ordering capability in membranes. J. Phys. Chem. B. Letters. 110, 25562-25564. PDF

  23. K. Murzyn, W. Zhao, M. Karttunen, M. Kurdziel, and T. Róg. 2006. Dynamics of water at membrane surfaces: Effect of headgroup structure. Biointerphases. 1(3):98-105. PDF

  24. K. Murzyn, T. Róg, W. Blicharski, M. Dutka, J. Pyka, S. Szytula, W. Froncisz. 2006. Influence of the disulfide bond configuration on the dynamics of the spin label attached to cytochrome c. Proteins. 62:1088-1100. PDF

  25. S. Vainio, M. Jansen, M. Koivusalo, T. Róg, M. Karttunen, I. Vattulainen, E. Ikonen. 2006. Desmosterol cannot replace cholesterol in lipid rafts. J. Biol. Chem. 281:348-355. PDF

ModMol: Publications_2006-2008 (last edited 2011-04-12 12:47:53 by AgnieszkaKruszyna)